Presentation
Photosynthesis in Harmonically Oscillating Light
Department of Biophysics, Faculty of SciencePalacký University Olomouc (UPOL), Czech Republic
Rodeostat Open Hardware Potentiostat
Successes include easy manufacturing, published research, and collaborations. Challenges include supply-chain issues, software support, and documentation.
Lessons from a colorimeter
Support communities expanding research capacity should shift focus from one Community to Market, prepare for the long haul, and know… Read More »Lessons from a colorimeter
Designing open instruments for photosynthesis research
Paris Research, Sony Computer Science Laboratories, FranceCPCV, Department of Chemistry, École Normale Supérieure,PSL University, Sorbonne Université, CNRS, Paris, France CNRS,… Read More »Designing open instruments for photosynthesis research
Practical considerations for experimental realizations
Detailed description of the development of the DREAM macroscope instrument, designed for applying the DREAM protocols on plants, and a… Read More »Practical considerations for experimental realizations
Characteristics of Photosystem Operation that Affect Biomass Production in Unicellular Algae
Jacob Blaustein Institutes for Desert Research,Ben Gurion University of the Negev Midreshet, Israel
Navigating the edge between photoprotection and damage in the response to light fluctuations
Light response diversity in photosynthetic organisms and optimisation for increased biomass productivity in algae and crops.
The light-use efficiency in oscillating and fluctuating light: An introduction
Palacký University, Olomouc, Czech RepublicJan IngenHousz Institute, Wageningen, The Netherlands Département de chimie, École normale supérieure, PSL University,Sorbonne Université, CNRS,… Read More »The light-use efficiency in oscillating and fluctuating light: An introduction
Photosynthetic regulations, respiratory mutants and crazy raspberries in the time domain
Mitochondrial respiration, starch metabolism, chlorophyll fluorescence, and photosynthetic regulation.
Measuring chlorophyll fluorescence induction during single turnover flashes in intact leaves
Frequency domain measurements, chlorophyll fluorescence, and the validity of the genty-expression for psii-quantum efficiency.
The Sound of Photosynthesis”: From Signal Patterns and Frequency Analysis to Practical Applications
Photon Systems Instruments, spol. s r.o.
Putting Frequency Domain Fluorescence Measurements Into Context: A Short Overview on Commonly Used Fluorescence Approaches
An overview of fluorescence measurement approaches for assessing photosynthetic efficiency and plant health, from leaf-level to satellite-based monitoring systems.
The Xanthophyll Cycle as the Main Driver of Non-Photochemical Quenching in Nannochloropsis
Explorations on frequency domain mathematical models, applications, instruments, and references.
Thylakoid membrane heterogeneity, proteins trafficking and its role in photosynthetic function
The impact of protein localisation and mobility on photosynthetic function and the relevance of sub-cellular and cell-to-cell heterogeneities in isogenic… Read More »Thylakoid membrane heterogeneity, proteins trafficking and its role in photosynthetic function
PSI-PSII megacomplex: Physical properties of the photosynthetic complex that are thought to contribute to quenching
Statistical methods for comparing energy spillover changes in large complexes between PSI and PSII. Connection type between PSI and PSII… Read More »PSI-PSII megacomplex: Physical properties of the photosynthetic complex that are thought to contribute to quenching
Round-table discussion: identify model amendments to simulate in silico dynamics of NPQ and other regulatory mechanisms in different organisms
The round table explored frequency-domain analysis applications in photosynthesis, comparing it to time-domain analysis and discussing its potential to enhance… Read More »Round-table discussion: identify model amendments to simulate in silico dynamics of NPQ and other regulatory mechanisms in different organisms
Beyond two-dimensional NPQ: Exploring the spectral properties of NPQ by timeresolved spectroscopy
Explorations about npq, photoinhibition, and psii’s functional antenna size.
The site and formation of the qE state in plants
Noted presentation on the site and formation of the qE state in plants given at the DREAM summer school.
A comparative overview of system identification approaches for complex phenomena in photosynthesis
Inquires about applying system identification techniques from engineering to understand responses to modulated light, exploring the potential of machine learning… Read More »A comparative overview of system identification approaches for complex phenomena in photosynthesis
Estimating Frequency Response Functions
Lecture covers signals, measurement setup, time-frequency domain, linear system response, resistor example, frequency response function estimation, leakage, windowing, and local… Read More »Estimating Frequency Response Functions
Nonlinear System Identification
Linear approximations of nonlinear systems are discussed, including nonlinearities in the frequency domain and nonparametric disturbance analysis.
Frequency-Domain System Identification: Dronpa2 Case Study
How to perform frequency-domain data-driven modelling.
A frequency domain analysis of NPQ dynamics across different photosynthetic species
Challenges and opportunities of frequency-domain experiments in photosynthesis research, including biodiversity of photoprotective mechanisms and potential applications of system identification… Read More »A frequency domain analysis of NPQ dynamics across different photosynthetic species
Constitutive and regulatory responses of Arabidopsis thaliana to harmonically oscillating light
Inquires about system identification techniques, electron transport chain models, metabolism integration, and omics data’s predictive power for photosynthesis.
Modelling photosynthetic function in a changing light
Modelling photosynthesis in changing light environments requires considering regulatory processes, their time constants, and existing literature.
Alternating current biology
Inquires about the role of mathematical models, systems identification, and frequency-domain experiments in understanding plant responses to oscillating light and… Read More »Alternating current biology
DREAM project presentation
Exploiting photosynthetic fluorescence and regulation dynamics for stress sensing and light-use efficiency enhancement.